track eCLIP-seq_rep1
bigDataUrl rep1.afterTrimming.mapped_ACA.sorted.bam
shortLabel TDP43-UGtail-rescuedReads-rep1
longLabel TDP43-UGtail-rescuedReads-rep1
color 204,0,0
visibility full
type bam

track eCLIP-seq_rep2
bigDataUrl rep2.afterTrimming.mapped_ACA.sorted.bam
shortLabel TDP43-UGtail-rescuedReads-rep2
longLabel TDP43-UGtail-rescuedReads-rep2
color 0,0,204
visibility full
type bam

track TARDBP+
compositeTrack on
shortLabel TARDBP plus
longLabel shRNA and eCLIP (target: TARDBP) plus strand
maxHeightPixels 100:48:8
visibility full
autoScale on
type bigWig
allButtonPair on

	      				
				track CLIP1+
				bigDataUrl ENCFF569LQN.bigWig
				shortLabel CLIP1+
				longLabel CLIP rep1 +
				autoScale on
				color 252,141,98
				visibility full
				graphTypeDefault bar
				parent TARDBP+ on
				type bigWig
				
				track CLIP2+
				bigDataUrl ENCFF435YMY.bigWig
				shortLabel CLIP2+
				longLabel CLIP rep2 +
				autoScale on
				color 252,141,98
				visibility full
				graphTypeDefault bar
				parent TARDBP+ on
				type bigWig

				track KD1+
				bigDataUrl ENCFF807JSC.bigWig
				shortLabel KD1+
				longLabel KD rep1 +
				autoScale on
				color 102,194,165
				visibility full
				graphTypeDefault bar
				parent TARDBP+ on
				type bigWig

				track KD2+
				bigDataUrl ENCFF461ZYL.bigWig
				shortLabel KD2+
				longLabel KD rep2 +
				autoScale on
				color 102,194,165
				visibility full
				graphTypeDefault bar
				parent TARDBP+ on
				type bigWig

				track WT1+
				bigDataUrl ENCFF330WHZ.bigWig
				shortLabel WT1+
				longLabel WT rep1 +
				autoScale on
				color 141,160,203
				visibility full
				graphTypeDefault bar
				parent TARDBP+ on
				type bigWig

				track WT2+
				bigDataUrl ENCFF464VII.bigWig
				shortLabel WT2+
				longLabel WT rep2 +
				autoScale on
				color 141,160,203
				visibility full
				graphTypeDefault bar
				parent TARDBP+ on
				type bigWig

track TARDBP-
compositeTrack on
shortLabel TARDBP minus
longLabel shRNA and eCLIP (target: TARDBP) minus strand
maxHeightPixels 100:48:8
visibility full
autoScale on
type bigWig
allButtonPair on

				
				track CLIP1-
				bigDataUrl ENCFF242QQJ.bigWig
				shortLabel CLIP1-
				longLabel CLIP rep1 -
				autoScale on
				color 252,141,98
				visibility full
				graphTypeDefault bar
				parent TARDBP- on
				type bigWig

				track CLIP2-
				bigDataUrl ENCFF979RKC.bigWig
				shortLabel CLIP2-
				longLabel CLIP rep2 -
				autoScale on
				color 252,141,98
				visibility full
				graphTypeDefault bar
				parent TARDBP- on
				type bigWig

				track KD1-
				bigDataUrl ENCFF162PAG.bigWig
				shortLabel KD1-
				longLabel KD rep1 -
				autoScale on
				color 102,194,165
				visibility full
				graphTypeDefault bar
				parent TARDBP- on
				type bigWig

				track KD2-
				bigDataUrl ENCFF020DDC.bigWig
				shortLabel KD2-
				longLabel KD rep2 -
				autoScale on
				color 102,194,165
				visibility full
				graphTypeDefault bar
				parent TARDBP- on
				type bigWig

				track WT1-
				bigDataUrl ENCFF297ZOE.bigWig
				shortLabel WT1-
				longLabel WT rep1 -
				autoScale on
				color 141,160,203
				visibility full
				graphTypeDefault bar
				parent TARDBP- on
				type bigWig

				track WT2-
				bigDataUrl ENCFF071GCX.bigWig
				shortLabel WT2-
				longLabel WT rep2 -
				autoScale on
				color 141,160,203
				visibility full
				graphTypeDefault bar
				parent TARDBP- on
				type bigWig

track peaks
compositeTrack on
shortLabel TARDBP peaks
longLabel TARDBP raw eCLIP peaks
maxHeightPixels 100:48:8
visibility full
autoScale on
type bigBed
allButtonPair on

				track peak1
				bigDataUrl ENCFF022DCK.bigBed
				shortLabel peak1
				longLabel CLIP peaks 1
				autoScale on
				color 252,141,98
				visibility full
				graphTypeDefault bar
				parent peaks on
				type bigBed
				
				track peak2
				bigDataUrl ENCFF118WWO.bigBed
				shortLabel peak2
				longLabel CLIP peaks 2
				autoScale on
				color 252,141,98
				visibility full
				graphTypeDefault bar
				parent peaks on
				type bigBed