NOD-clean-M-ATAC-2-9_GCTACGCT_L001_R2_001.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	NOD-clean-M-ATAC-2-9_GCTACGCT_L001_R2_001.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	21177987
Sequences flagged as poor quality	0
Sequence length	126
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

$Per base sequence content$

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTGTCTCTTATACACATCTGACGCTGCCGACGAGTGTAGATCTCGGTGGT	65162	0.307687411461722	Illumina Single End PCR Primer 1 (95% over 21bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ACCGTAT	2390	72.310745	94
CGACGTA	3265	52.098335	92
ACGCCGT	2695	51.503704	94
TGTCGGT	3010	50.860786	93
TCGACGT	3380	50.72864	91
GGTCGAC	3795	46.43715	89
GTCGACG	3845	45.655464	90
ACGTATC	3550	44.465855	94
CACCGTA	3905	44.431007	93
GTGATCG	2320	42.81878	91
TGGTCGA	4100	42.485497	88
GTCGGTG	3635	42.30299	94
TGATCGC	2495	39.81524	92
TAGATCG	3025	39.58876	88
ATCGCCG	2305	39.554955	94
GTGGACG	3860	38.603455	90
CCGTCGA	1975	38.585155	91
GTCACCG	4900	38.32502	91
GATCGCG	3165	38.05125	90
TACGAGT	2065	37.89176	94