ACMI v1.0 installation guide
(c) 2007 Frank DiMaio

ACMI is distributed in two parts.  The archive 'acmi-1.1.tar.gz' contains the
source code, while 'nmerdb-1.0.tar.gz' contains the 5-mer database.  Unzip both
files to a convenient location.

ACMI requires version 3.1.2 of the FFTW fast Fourier transform library.  FFTW3
must be installed before compiling ACMI.  The software and installation
instructions for this library are available at http://www.fftw.org/.

Once installed, edit lines 13 and 14 of ACMI's Makefile to point to FFTW's
installation directory.  Run 'make all' to build all the tools in the ACMI
suite of programs.

When any programs in the ACMI suite are run, use the environment variable
"ACMI_NMERDB" to specify the folder containing the nmer database, e.g., using
the C shell:

> setenv ACMI_NMERDB "/usr/local/acmi/nmerlib"